Spelling debates/Encyclopedia or Encyclopaedia?

From Tardis Wiki, the free Doctor Who reference

So now that we have a full-on televised episode presenting us with (the American) spelling of encyclopaediaEncyclopedia Gallifreya — do we drop the vestigial "ae" and go with just "e", or do we look on this as a one-off case?

There are also several reference books that go with the American spelling.