Kidney

Kidneys were organs present in most humanoid species. After House murdered the Time Lord known as the Corsair, his kidneys were given to Uncle, one of House's patchwork slaves. (TV: The Doctor's Wife)

While dying from the Judas tree poison, the Eleventh Doctor stated that the kidneys were "always the first to quit". (TV: Let's Kill Hitler)

When the Doctor's TARDIS matrix was transported into the body of Idris, her energy was burning out the body where she had been placed. As one of the first signs, she stated that one kidney had already given out. (TV: The Doctor's Wife)

After his regeneration, the Twelfth Doctor noted he had new kidneys, adding that he didn't like the colour. (TV: The Time of the Doctor)

Alfred took the kidneys, liver and spleen of his first victim with the intention of using them to revive Julius Quilter when he died. (HOMEVID: Unnatural Selection)

Dorothy McShane had her kidney function checked with a "sinister-looking instrument" when she underwent a full medical examination to be a passenger on the Virgil. (PROSE: At Childhood's End)

The Doctor is known to retain kidney stones from their previous self.