Uncle
The Doctor's uncle on Gallifrey was known as the Uncle, which the Eleventh Doctor explained to River Song as being "a [Time Lord] thing". (GAME: The Eternity Clock, TV: Time and the Rani)
The uncle of Peter and David was a human inventor of time travel. (PROSE: Timechase)
Mollie Dawson had an uncle who fought in the Crimean War. (TV: The Evil of the Daleks)
Watkins was the uncle of Isobel Watkins. (TV: The Invasion)
Federico was the uncle of Giuliano. (TV: The Masque of Mandragora)
Tim Latimer had an uncle who had a six month posting in Johannesburg. (TV: Human Nature)
Digby Arwell was the uncle of Cyril and Lily Arwell. (TV: The Doctor, the Widow and the Wardrobe)
Liz Shaw had an uncle called Bernard (AUDIO: The Last Post) and another who worked at Eton. (AUDIO: The Blame Game)
Other references
"Bob's your uncle" was a British idiom. (TV: Hide)
Uncle Sam was a figure associated with the United States of America. (TV: Dreamland, The Sound of Drums) In 1959, CIA agent Jerome Weismuller claimed that a radio destroyed by Gavrok of the Bannerman was "property of Uncle Sam", to which Gavrok asked where their uncle Sam was as Hawk attempted to correct him. (TV: Delta and the Bannermen)
Uncle was an entrepreneur and crime lord from New Memphis (PROSE: Judgement of the Judoon)
Alongside Auntie and Nephew, Uncle was a servant of House. (TV: The Doctor's Wife)
Within the Dalek City on Skaro, the Twelfth Doctor quipped to Davros that his personal chamber was "exactly where you dump a smelly old uncle / family pet / genius scientist who couldn't even invent legs." (TV: The Witch's Familiar)